Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF440Q8IYI8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF440Q8IYI8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 AL357033.4-201ENST00000617703 1807 ntBASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 AC073592.3-201ENST00000625118 1834 ntBASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 MCCD1P1-208ENST00000445732 328 ntBASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 KRT17P2-201ENST00000300992 1314 ntBASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 KRT8P45-201ENST00000414328 1447 ntBASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF440Q8IYI8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 AC079598.2-202ENST00000546624 1451 ntBASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF440Q8IYI8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 KRT18P41-201ENST00000518924 1277 ntBASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF440Q8IYI8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZNF440Q8IYI8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms