Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 Z98044.1-201ENST00000632503 1764 ntBASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 ARMC10P1-201ENST00000313754 855 ntBASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 MIR564-202ENST00000385049 94 ntBASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 TMPOP1-202ENST00000424642 1267 ntBASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCUBE3Q8IX30 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 WWOX-216ENST00000569818 525 ntBASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 AL499627.1-201ENST00000569373 2188 ntBASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 ANO7L1-203ENST00000602586 1720 ntBASIC19.65■□□□□ 0.74
SCUBE3Q8IX30 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCUBE3Q8IX30 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SCUBE3Q8IX30 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCUBE3Q8IX30 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCUBE3Q8IX30 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 AC005521.1-201ENST00000393351 872 ntBASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 AC113347.1-201ENST00000413321 391 ntBASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 LIN28AP1-201ENST00000429574 405 ntBASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 AL137013.1-201ENST00000432946 1228 ntBASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SCUBE3Q8IX30 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 TERF1P1-201ENST00000311003 1181 ntBASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 AL138966.2-201ENST00000621997 464 ntBASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCUBE3Q8IX30 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.62■□□□□ 0.73
SCUBE3Q8IX30 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms