Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 IRX1P1-201ENST00000438849 1838 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 GPAT2P1-201ENST00000444924 1672 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 AL032819.2-201ENST00000624543 2162 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 AL023973.1-201ENST00000624619 620 ntBASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC093484.2-201ENST00000580996 2166 ntBASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC022616.7-201ENST00000525383 220 ntBASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC087388.1-201ENST00000571370 1112 ntBASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 NTF6B-201ENST00000591913 560 ntBASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM48Q8IWZ4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 FP475955.4-201ENST00000623131 1990 ntBASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 AL023284.2-201ENST00000405850 579 ntBASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 TSPY5P-201ENST00000426936 936 ntBASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 WWOX-216ENST00000569818 525 ntBASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CR769767.2-201ENST00000622735 460 ntBASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM48Q8IWZ4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM48Q8IWZ4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms