Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 AC093503.3-201ENST00000624917 2352 ntBASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BHLHA9Q7RTU4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 AL031133.1-201ENST00000406807 723 ntBASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 SPDYE13P-201ENST00000445314 798 ntBASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 AC092647.4-201ENST00000457211 535 ntBASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BHLHA9Q7RTU4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BHLHA9Q7RTU4 AC087289.5-201ENST00000586076 3175 ntBASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 AC092597.1-201ENST00000487352 616 ntBASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 AC083849.1-201ENST00000615227 514 ntBASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
BHLHA9Q7RTU4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 AC112907.2-201ENST00000448639 330 ntBASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BHLHA9Q7RTU4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BHLHA9Q7RTU4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms