Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 UBE2SP1-201ENST00000450587 669 ntBASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 ZNF815P-204ENST00000434898 1737 ntBASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RFPL4BQ6ZWI9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 AC084018.2-201ENST00000613093 2607 ntBASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 RARRES2P10-201ENST00000564312 460 ntBASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 HLA-A-209ENST00000638375 975 ntBASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 LINC01465-201ENST00000408887 1940 ntBASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RFPL4BQ6ZWI9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AP002982.1-201ENST00000492365 877 ntBASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFPL4BQ6ZWI9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RFPL4BQ6ZWI9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms