Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COLCA1Q6ZS62 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 AP000593.1-201ENST00000393668 712 ntBASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 NAPSB-206ENST00000562112 1266 ntBASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COLCA1Q6ZS62 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 INGX-201ENST00000359239 846 ntBASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 AC128688.1-201ENST00000487626 519 ntBASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 CR769767.2-201ENST00000622735 460 ntBASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 HOXB1-202ENST00000577092 1414 ntBASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 MYLKP1-201ENST00000509077 1580 ntBASIC16.09■□□□□ 0.17
COLCA1Q6ZS62 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.08■□□□□ 0.17
COLCA1Q6ZS62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
COLCA1Q6ZS62 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.08■□□□□ 0.17
COLCA1Q6ZS62 AC104581.1-202ENST00000635932 2618 ntBASIC16.08■□□□□ 0.17
COLCA1Q6ZS62 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 KRT8P7-201ENST00000533003 1432 ntBASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 AC036111.1-201ENST00000533973 1582 ntBASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COLCA1Q6ZS62 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms