Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 MIR3180-1-201ENST00000580374 94 ntBASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 MIR3180-3-201ENST00000584616 94 ntBASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 AC092119.3-201ENST00000612618 583 ntBASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC62Q6P9F0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 AP002383.4-201ENST00000442518 975 ntBASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 TSSC2-201ENST00000450217 709 ntBASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 AC010240.3-201ENST00000607688 395 ntBASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 AC012313.10-201ENST00000623509 926 ntBASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC62Q6P9F0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 AL121672.3-201ENST00000608644 468 ntBASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC62Q6P9F0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC62Q6P9F0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC62Q6P9F0 AC093525.10-201ENST00000625130 1569 ntBASIC21.02■□□□□ 0.95
CCDC62Q6P9F0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC62Q6P9F0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 BX276092.5-203ENST00000456199 560 ntBASIC21■□□□□ 0.95
CCDC62Q6P9F0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 KRT8P26-201ENST00000534154 1276 ntBASIC21■□□□□ 0.95
CCDC62Q6P9F0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC62Q6P9F0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC62Q6P9F0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC62Q6P9F0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms