Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT40Q6A162 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT40Q6A162 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.68■■□□□ 1.06
KRT40Q6A162 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT40Q6A162 DUX4L26-201ENST00000489078 1255 ntBASIC21.68■■□□□ 1.06
KRT40Q6A162 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KRT40Q6A162 RCC2P3-201ENST00000418112 1537 ntBASIC21.68■■□□□ 1.06
KRT40Q6A162 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT40Q6A162 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT40Q6A162 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT40Q6A162 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KRT40Q6A162 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KRT40Q6A162 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 AC005082.1-201ENST00000413042 2259 ntBASIC21.67■■□□□ 1.06
KRT40Q6A162 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT40Q6A162 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT40Q6A162 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT40Q6A162 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT40Q6A162 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT40Q6A162 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 AIRN-201ENST00000601203 4374 ntBASIC21.67■■□□□ 1.06
KRT40Q6A162 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 AC073508.3-201ENST00000619697 1419 ntBASIC21.67■■□□□ 1.06
KRT40Q6A162 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
KRT40Q6A162 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
KRT40Q6A162 AC087388.1-201ENST00000571370 1112 ntBASIC21.67■■□□□ 1.06
KRT40Q6A162 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.67■■□□□ 1.06
KRT40Q6A162 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.67■■□□□ 1.06
KRT40Q6A162 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KRT40Q6A162 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT40Q6A162 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
KRT40Q6A162 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KRT40Q6A162 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.66■■□□□ 1.06
KRT40Q6A162 AL137013.1-201ENST00000432946 1228 ntBASIC21.66■■□□□ 1.06
KRT40Q6A162 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
KRT40Q6A162 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KRT40Q6A162 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT40Q6A162 NEFHP1-201ENST00000412845 2629 ntBASIC21.66■■□□□ 1.06
KRT40Q6A162 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT40Q6A162 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT40Q6A162 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.66■■□□□ 1.06
KRT40Q6A162 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
KRT40Q6A162 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 AL499627.1-201ENST00000569373 2188 ntBASIC21.65■■□□□ 1.06
KRT40Q6A162 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KRT40Q6A162 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.65■■□□□ 1.06
KRT40Q6A162 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT40Q6A162 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT40Q6A162 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT40Q6A162 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
KRT40Q6A162 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT40Q6A162 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT40Q6A162 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.65■■□□□ 1.06
KRT40Q6A162 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT40Q6A162 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
KRT40Q6A162 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
KRT40Q6A162 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT40Q6A162 AL357033.4-201ENST00000617703 1807 ntBASIC21.64■■□□□ 1.06
KRT40Q6A162 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms