Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UBR4Q5T4S7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC023141.5-201ENST00000458585 616 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 GPR32P1-201ENST00000601788 811 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC107918.4-202ENST00000641623 219 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC024563.2-201ENST00000603282 481 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AP002414.3-201ENST00000589352 1468 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AL356309.3-201ENST00000624132 1934 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC148477.9-201ENST00000623974 539 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC10.2□□□□□ -0.78
UBR4Q5T4S7 MIR6805-201ENST00000615055 62 ntBASIC10.2□□□□□ -0.78
UBR4Q5T4S7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
UBR4Q5T4S7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms