Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDLRAP1Q5SW96 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AL023284.2-201ENST00000405850 579 ntBASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 ECEL1P3-201ENST00000427961 737 ntBASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 MCCD1P1-208ENST00000445732 328 ntBASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AC005363.2-201ENST00000618631 242 ntBASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AC083906.6-201ENST00000641366 219 ntBASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.62■□□□□ 0.57
LDLRAP1Q5SW96 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 GPAT2P1-201ENST00000444924 1672 ntBASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 RCC2P3-201ENST00000418112 1537 ntBASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 SLC25A3P1-201ENST00000443844 931 ntBASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
LDLRAP1Q5SW96 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 AL109659.2-201ENST00000606809 1674 ntBASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 MIR4674-201ENST00000582457 87 ntBASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 AC068587.9-201ENST00000641814 219 ntBASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LDLRAP1Q5SW96 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAP1Q5SW96 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LDLRAP1Q5SW96 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.59■□□□□ 0.57
LDLRAP1Q5SW96 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LDLRAP1Q5SW96 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.59■□□□□ 0.57
LDLRAP1Q5SW96 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms