Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 AKR1C7P-201ENST00000305623 895 ntBASIC17.95■□□□□ 0.46
CLDN6P56747 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN6P56747 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.95■□□□□ 0.46
CLDN6P56747 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN6P56747 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN6P56747 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN6P56747 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN6P56747 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN6P56747 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CLDN6P56747 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN6P56747 AL121912.1-201ENST00000603683 238 ntBASIC17.94■□□□□ 0.46
CLDN6P56747 IGHV3-41-201ENST00000613121 348 ntBASIC17.94■□□□□ 0.46
CLDN6P56747 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLDN6P56747 AC008556.1-201ENST00000610908 2040 ntBASIC17.94■□□□□ 0.46
CLDN6P56747 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 HLA-A-201ENST00000376802 1334 ntBASIC17.94■□□□□ 0.46
CLDN6P56747 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN6P56747 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN6P56747 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN6P56747 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN6P56747 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
CLDN6P56747 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN6P56747 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLDN6P56747 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 KRT18P23-201ENST00000435622 1283 ntBASIC17.93■□□□□ 0.46
CLDN6P56747 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 AC106795.1-205ENST00000512851 1056 ntBASIC17.93■□□□□ 0.46
CLDN6P56747 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN6P56747 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN6P56747 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 AL353801.3-201ENST00000609898 542 ntBASIC17.93■□□□□ 0.46
CLDN6P56747 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN6P56747 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN6P56747 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN6P56747 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN6P56747 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN6P56747 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN6P56747 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN6P56747 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN6P56747 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CLDN6P56747 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN6P56747 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN6P56747 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN6P56747 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms