Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.12■□□□□ 0.49
CLCN2P51788 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN2P51788 AC026471.5-201ENST00000615068 467 ntBASIC18.12■□□□□ 0.49
CLCN2P51788 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN2P51788 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 AC139713.2-201ENST00000641328 2723 ntBASIC18.12■□□□□ 0.49
CLCN2P51788 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN2P51788 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLCN2P51788 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN2P51788 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCN2P51788 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CLCN2P51788 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLCN2P51788 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLCN2P51788 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN2P51788 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLCN2P51788 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN2P51788 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN2P51788 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN2P51788 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN2P51788 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN2P51788 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN2P51788 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLCN2P51788 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN2P51788 AL445675.2-201ENST00000620291 557 ntBASIC18.1■□□□□ 0.49
CLCN2P51788 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN2P51788 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
CLCN2P51788 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN2P51788 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN2P51788 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN2P51788 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 ZNF815P-204ENST00000434898 1737 ntBASIC18.09■□□□□ 0.49
CLCN2P51788 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN2P51788 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CLCN2P51788 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCN2P51788 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN2P51788 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCN2P51788 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN2P51788 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.09■□□□□ 0.49
CLCN2P51788 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCN2P51788 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN2P51788 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN2P51788 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms