Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.15■□□□□ 0.98
USP11P51784 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP11P51784 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.15■□□□□ 0.98
USP11P51784 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP11P51784 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.15■□□□□ 0.98
USP11P51784 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.15■□□□□ 0.98
USP11P51784 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP11P51784 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP11P51784 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP11P51784 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP11P51784 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
USP11P51784 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.14■□□□□ 0.98
USP11P51784 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.14■□□□□ 0.97
USP11P51784 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.14■□□□□ 0.97
USP11P51784 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.14■□□□□ 0.97
USP11P51784 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 AC104390.1-201ENST00000555663 520 ntBASIC21.14■□□□□ 0.97
USP11P51784 GCSHP2-201ENST00000560971 527 ntBASIC21.14■□□□□ 0.97
USP11P51784 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
USP11P51784 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.14■□□□□ 0.97
USP11P51784 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
USP11P51784 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.14■□□□□ 0.97
USP11P51784 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP11P51784 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
USP11P51784 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 AP000593.1-201ENST00000393668 712 ntBASIC21.13■□□□□ 0.97
USP11P51784 SEC1P-202ENST00000473944 940 ntBASIC21.13■□□□□ 0.97
USP11P51784 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.13■□□□□ 0.97
USP11P51784 AC063952.2-201ENST00000498792 1227 ntBASIC21.13■□□□□ 0.97
USP11P51784 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.13■□□□□ 0.97
USP11P51784 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
USP11P51784 AC024243.1-201ENST00000609234 778 ntBASIC21.13■□□□□ 0.97
USP11P51784 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.13■□□□□ 0.97
USP11P51784 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP11P51784 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.12■□□□□ 0.97
USP11P51784 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.12■□□□□ 0.97
USP11P51784 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.12■□□□□ 0.97
USP11P51784 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.12■□□□□ 0.97
USP11P51784 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
USP11P51784 AC112777.1-201ENST00000540175 1423 ntBASIC21.12■□□□□ 0.97
USP11P51784 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP11P51784 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
USP11P51784 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.11■□□□□ 0.97
USP11P51784 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 MIR3180-4-201ENST00000582223 153 ntBASIC21.11■□□□□ 0.97
USP11P51784 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
USP11P51784 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
USP11P51784 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.11■□□□□ 0.97
USP11P51784 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms