Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CDC34P49427 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.8□□□□□ -0.04
CDC34P49427 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDC34P49427 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDC34P49427 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
CDC34P49427 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CDC34P49427 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CDC34P49427 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 SIRPAP1-201ENST00000448467 1770 ntBASIC14.79□□□□□ -0.04
CDC34P49427 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.79□□□□□ -0.04
CDC34P49427 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC34P49427 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.79□□□□□ -0.04
CDC34P49427 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.79□□□□□ -0.04
CDC34P49427 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CDC34P49427 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CDC34P49427 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CDC34P49427 AL139384.1-201ENST00000612143 3047 ntBASIC14.79□□□□□ -0.04
CDC34P49427 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDC34P49427 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
CDC34P49427 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.78□□□□□ -0.04
CDC34P49427 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDC34P49427 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDC34P49427 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CDC34P49427 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CDC34P49427 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.78□□□□□ -0.04
CDC34P49427 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.78□□□□□ -0.04
CDC34P49427 AL139246.5-201ENST00000606645 996 ntBASIC14.78□□□□□ -0.04
CDC34P49427 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDC34P49427 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC34P49427 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDC34P49427 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.78□□□□□ -0.04
CDC34P49427 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDC34P49427 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDC34P49427 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDC34P49427 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.77□□□□□ -0.04
CDC34P49427 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms