Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MMP13P45452 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MMP13P45452 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MMP13P45452 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 SNORA78-201ENST00000459373 127 ntBASIC19.48■□□□□ 0.71
MMP13P45452 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 AC130371.2-201ENST00000619443 611 ntBASIC19.48■□□□□ 0.71
MMP13P45452 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.48■□□□□ 0.71
MMP13P45452 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
MMP13P45452 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MMP13P45452 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
MMP13P45452 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.47■□□□□ 0.71
MMP13P45452 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.47■□□□□ 0.71
MMP13P45452 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
MMP13P45452 MESTP1-201ENST00000404287 994 ntBASIC19.47■□□□□ 0.71
MMP13P45452 TSPY23P-201ENST00000440136 739 ntBASIC19.47■□□□□ 0.71
MMP13P45452 AC116562.2-201ENST00000507042 360 ntBASIC19.47■□□□□ 0.71
MMP13P45452 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.47■□□□□ 0.71
MMP13P45452 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.47■□□□□ 0.71
MMP13P45452 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.47■□□□□ 0.71
MMP13P45452 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.47■□□□□ 0.71
MMP13P45452 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
MMP13P45452 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.47■□□□□ 0.71
MMP13P45452 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MMP13P45452 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.47■□□□□ 0.71
MMP13P45452 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MMP13P45452 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MMP13P45452 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 FAM207BP-201ENST00000447172 505 ntBASIC19.46■□□□□ 0.71
MMP13P45452 AC008040.2-201ENST00000461049 708 ntBASIC19.46■□□□□ 0.71
MMP13P45452 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.46■□□□□ 0.71
MMP13P45452 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP13P45452 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 MIR4785-201ENST00000585005 73 ntBASIC19.46■□□□□ 0.71
MMP13P45452 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.46■□□□□ 0.71
MMP13P45452 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
MMP13P45452 REXO1L10P-201ENST00000615707 1290 ntBASIC19.46■□□□□ 0.71
MMP13P45452 REXO1L12P-201ENST00000622156 912 ntBASIC19.46■□□□□ 0.71
MMP13P45452 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MMP13P45452 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.46■□□□□ 0.71
MMP13P45452 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.46■□□□□ 0.71
MMP13P45452 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MMP13P45452 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms