Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.03■□□□□ 0.96
HTTP42858 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.03■□□□□ 0.96
HTTP42858 MIR5100-201ENST00000579544 119 ntBASIC21.03■□□□□ 0.96
HTTP42858 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.03■□□□□ 0.96
HTTP42858 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.03■□□□□ 0.96
HTTP42858 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HTTP42858 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTTP42858 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
HTTP42858 AC004832.2-201ENST00000426397 482 ntBASIC21.02■□□□□ 0.96
HTTP42858 AC112482.1-201ENST00000492080 688 ntBASIC21.02■□□□□ 0.96
HTTP42858 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.02■□□□□ 0.96
HTTP42858 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.02■□□□□ 0.96
HTTP42858 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.02■□□□□ 0.96
HTTP42858 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.02■□□□□ 0.96
HTTP42858 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.02■□□□□ 0.96
HTTP42858 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.02■□□□□ 0.96
HTTP42858 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
HTTP42858 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.02■□□□□ 0.96
HTTP42858 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTTP42858 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.02■□□□□ 0.96
HTTP42858 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.02■□□□□ 0.96
HTTP42858 ZNF815P-204ENST00000434898 1737 ntBASIC21.02■□□□□ 0.96
HTTP42858 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HTTP42858 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTTP42858 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
HTTP42858 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.02■□□□□ 0.95
HTTP42858 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.02■□□□□ 0.95
HTTP42858 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HTTP42858 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.02■□□□□ 0.95
HTTP42858 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HTTP42858 KRT8P3-201ENST00000519669 1449 ntBASIC21.02■□□□□ 0.95
HTTP42858 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
HTTP42858 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.02■□□□□ 0.95
HTTP42858 AC005336.2-201ENST00000593183 939 ntBASIC21.02■□□□□ 0.95
HTTP42858 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.02■□□□□ 0.95
HTTP42858 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.01■□□□□ 0.95
HTTP42858 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HTTP42858 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.01■□□□□ 0.95
HTTP42858 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HTTP42858 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.01■□□□□ 0.95
HTTP42858 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
HTTP42858 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
HTTP42858 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.01■□□□□ 0.95
HTTP42858 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
HTTP42858 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HTTP42858 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21■□□□□ 0.95
HTTP42858 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HTTP42858 HIST2H3DP1-201ENST00000401004 416 ntBASIC21■□□□□ 0.95
HTTP42858 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21■□□□□ 0.95
HTTP42858 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21■□□□□ 0.95
HTTP42858 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21■□□□□ 0.95
HTTP42858 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
HTTP42858 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21■□□□□ 0.95
HTTP42858 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
HTTP42858 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
HTTP42858 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HTTP42858 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HTTP42858 AP003733.1-201ENST00000491725 852 ntBASIC21■□□□□ 0.95
HTTP42858 AC104390.1-201ENST00000555663 520 ntBASIC21■□□□□ 0.95
HTTP42858 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21■□□□□ 0.95
HTTP42858 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21■□□□□ 0.95
HTTP42858 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 HTR5BP-201ENST00000430851 1154 ntBASIC21■□□□□ 0.95
HTTP42858 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 AL591684.3-201ENST00000605187 298 ntBASIC21■□□□□ 0.95
HTTP42858 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTTP42858 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HTTP42858 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HTTP42858 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.99■□□□□ 0.95
HTTP42858 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
HTTP42858 AL512353.2-201ENST00000448759 1962 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms