Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SOX11P35716 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SOX11P35716 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SOX11P35716 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX11P35716 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX11P35716 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX11P35716 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 AP003071.4-201ENST00000562276 1284 ntBASIC18.29■□□□□ 0.52
SOX11P35716 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 LTB4R2-202ENST00000528054 3092 ntBASIC18.29■□□□□ 0.52
SOX11P35716 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 FP475955.4-201ENST00000623131 1990 ntBASIC18.29■□□□□ 0.52
SOX11P35716 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX11P35716 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX11P35716 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SOX11P35716 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SOX11P35716 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 AC087499.1-201ENST00000418141 1075 ntBASIC18.28■□□□□ 0.52
SOX11P35716 FAM197Y1-201ENST00000421178 764 ntBASIC18.28■□□□□ 0.52
SOX11P35716 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.28■□□□□ 0.52
SOX11P35716 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX11P35716 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SOX11P35716 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.28■□□□□ 0.52
SOX11P35716 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX11P35716 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX11P35716 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SOX11P35716 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX11P35716 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.27■□□□□ 0.52
SOX11P35716 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SOX11P35716 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX11P35716 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX11P35716 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SOX11P35716 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX11P35716 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX11P35716 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SOX11P35716 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX11P35716 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.27■□□□□ 0.51
SOX11P35716 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX11P35716 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SOX11P35716 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX11P35716 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
SOX11P35716 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.27■□□□□ 0.51
SOX11P35716 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX11P35716 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms