Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNA3P32297 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNA3P32297 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.75■□□□□ 0.75
CHRNA3P32297 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.75■□□□□ 0.75
CHRNA3P32297 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.75■□□□□ 0.75
CHRNA3P32297 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHRNA3P32297 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA3P32297 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA3P32297 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.74■□□□□ 0.75
CHRNA3P32297 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CHRNA3P32297 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.74■□□□□ 0.75
CHRNA3P32297 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CHRNA3P32297 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA3P32297 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
CHRNA3P32297 AL445675.2-201ENST00000620291 557 ntBASIC19.74■□□□□ 0.75
CHRNA3P32297 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA3P32297 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.74■□□□□ 0.75
CHRNA3P32297 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CHRNA3P32297 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHRNA3P32297 AC138932.1-201ENST00000534164 6830 ntBASIC19.73■□□□□ 0.75
CHRNA3P32297 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 NOC2LP2-201ENST00000407594 1944 ntBASIC19.73■□□□□ 0.75
CHRNA3P32297 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 AC005332.8-201ENST00000622750 2735 ntBASIC19.73■□□□□ 0.75
CHRNA3P32297 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.73■□□□□ 0.75
CHRNA3P32297 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHRNA3P32297 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 TSPY21P-201ENST00000433481 731 ntBASIC19.73■□□□□ 0.75
CHRNA3P32297 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.73■□□□□ 0.75
CHRNA3P32297 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.73■□□□□ 0.75
CHRNA3P32297 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.73■□□□□ 0.75
CHRNA3P32297 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHRNA3P32297 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHRNA3P32297 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA3P32297 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHRNA3P32297 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.72■□□□□ 0.75
CHRNA3P32297 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 REXO1L10P-201ENST00000615707 1290 ntBASIC19.72■□□□□ 0.75
CHRNA3P32297 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA3P32297 AL031985.4-201ENST00000642138 673 ntBASIC19.72■□□□□ 0.75
CHRNA3P32297 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.72■□□□□ 0.75
CHRNA3P32297 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHRNA3P32297 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.72■□□□□ 0.75
CHRNA3P32297 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.72■□□□□ 0.75
CHRNA3P32297 AC073592.3-201ENST00000625118 1834 ntBASIC19.72■□□□□ 0.75
CHRNA3P32297 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA3P32297 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CHRNA3P32297 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHRNA3P32297 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.71■□□□□ 0.75
CHRNA3P32297 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHRNA3P32297 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms