Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 AC116562.4-202ENST00000641738 218 ntBASIC18.89■□□□□ 0.61
HLA-DPA1P20036 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 AL020996.1-203ENST00000536896 2307 ntBASIC18.89■□□□□ 0.61
HLA-DPA1P20036 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLA-DPA1P20036 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 MMP23A-201ENST00000234610 1017 ntBASIC18.88■□□□□ 0.61
HLA-DPA1P20036 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 TSPY14P-201ENST00000303979 915 ntBASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AC092338.2-201ENST00000568827 1415 ntBASIC18.88■□□□□ 0.61
HLA-DPA1P20036 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLA-DPA1P20036 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 EGLN1P1-201ENST00000531623 762 ntBASIC18.87■□□□□ 0.61
HLA-DPA1P20036 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 AC008556.1-201ENST00000610908 2040 ntBASIC18.87■□□□□ 0.61
HLA-DPA1P20036 AL357033.4-201ENST00000617703 1807 ntBASIC18.87■□□□□ 0.61
HLA-DPA1P20036 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DPA1P20036 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 AP003041.3-201ENST00000527151 707 ntBASIC18.86■□□□□ 0.61
HLA-DPA1P20036 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 BX088651.1-201ENST00000540551 451 ntBASIC18.86■□□□□ 0.61
HLA-DPA1P20036 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
HLA-DPA1P20036 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DPA1P20036 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms