Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.05■□□□□ 0.64
NFKB1P19838 AC126763.1-201ENST00000552015 2118 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.05■□□□□ 0.64
NFKB1P19838 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 NEFHP1-201ENST00000412845 2629 ntBASIC19.05■□□□□ 0.64
NFKB1P19838 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NFKB1P19838 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.05■□□□□ 0.64
NFKB1P19838 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NFKB1P19838 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
NFKB1P19838 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
NFKB1P19838 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.04■□□□□ 0.64
NFKB1P19838 MIR1238-201ENST00000408483 83 ntBASIC19.04■□□□□ 0.64
NFKB1P19838 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 AC093827.2-201ENST00000512654 315 ntBASIC19.04■□□□□ 0.64
NFKB1P19838 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.04■□□□□ 0.64
NFKB1P19838 FITM1-202ENST00000559294 800 ntBASIC19.04■□□□□ 0.64
NFKB1P19838 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.04■□□□□ 0.64
NFKB1P19838 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NFKB1P19838 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
NFKB1P19838 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NFKB1P19838 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.03■□□□□ 0.64
NFKB1P19838 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
NFKB1P19838 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 AC090164.3-201ENST00000610780 2143 ntBASIC19.03■□□□□ 0.64
NFKB1P19838 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.03■□□□□ 0.64
NFKB1P19838 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.03■□□□□ 0.64
NFKB1P19838 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.03■□□□□ 0.64
NFKB1P19838 MIR4674-201ENST00000582457 87 ntBASIC19.03■□□□□ 0.64
NFKB1P19838 AL109659.2-201ENST00000606809 1674 ntBASIC19.03■□□□□ 0.64
NFKB1P19838 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.03■□□□□ 0.64
NFKB1P19838 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NFKB1P19838 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.03■□□□□ 0.64
NFKB1P19838 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.03■□□□□ 0.64
NFKB1P19838 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.02■□□□□ 0.64
NFKB1P19838 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 MCCD1P1-208ENST00000445732 328 ntBASIC19.02■□□□□ 0.64
NFKB1P19838 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.02■□□□□ 0.64
NFKB1P19838 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.02■□□□□ 0.64
NFKB1P19838 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.02■□□□□ 0.64
NFKB1P19838 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NFKB1P19838 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NFKB1P19838 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.02■□□□□ 0.64
NFKB1P19838 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NFKB1P19838 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NFKB1P19838 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.02■□□□□ 0.63
NFKB1P19838 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NFKB1P19838 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NFKB1P19838 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.01■□□□□ 0.63
NFKB1P19838 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms