Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 FAM207BP-201ENST00000447172 505 ntBASIC17.76■□□□□ 0.43
LAMP1P11279 TSPY20P-201ENST00000450910 630 ntBASIC17.76■□□□□ 0.43
LAMP1P11279 FAM201B-201ENST00000458407 597 ntBASIC17.76■□□□□ 0.43
LAMP1P11279 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
LAMP1P11279 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LAMP1P11279 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.76■□□□□ 0.43
LAMP1P11279 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LAMP1P11279 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.76■□□□□ 0.43
LAMP1P11279 MIR6786-201ENST00000616843 113 ntBASIC17.76■□□□□ 0.43
LAMP1P11279 FAM197Y4-202ENST00000622692 608 ntBASIC17.76■□□□□ 0.43
LAMP1P11279 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.76■□□□□ 0.43
LAMP1P11279 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LAMP1P11279 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LAMP1P11279 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.75■□□□□ 0.43
LAMP1P11279 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LAMP1P11279 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMP1P11279 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMP1P11279 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMP1P11279 B3GAT3P1-201ENST00000471720 806 ntBASIC17.75■□□□□ 0.43
LAMP1P11279 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LAMP1P11279 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.75■□□□□ 0.43
LAMP1P11279 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LAMP1P11279 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.75■□□□□ 0.43
LAMP1P11279 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LAMP1P11279 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LAMP1P11279 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LAMP1P11279 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LAMP1P11279 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMP1P11279 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMP1P11279 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LAMP1P11279 MESTP1-201ENST00000404287 994 ntBASIC17.74■□□□□ 0.43
LAMP1P11279 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.74■□□□□ 0.43
LAMP1P11279 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMP1P11279 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.74■□□□□ 0.43
LAMP1P11279 ITM2C-210ENST00000620962 501 ntBASIC17.74■□□□□ 0.43
LAMP1P11279 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.74■□□□□ 0.43
LAMP1P11279 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
LAMP1P11279 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LAMP1P11279 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LAMP1P11279 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LAMP1P11279 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
LAMP1P11279 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMP1P11279 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LAMP1P11279 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
LAMP1P11279 RCC2P3-201ENST00000418112 1537 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms