Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
THRAP10827 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.77■□□□□ 0.6
THRAP10827 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
THRAP10827 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
THRAP10827 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 TEX21P-204ENST00000641479 1693 ntBASIC18.77■□□□□ 0.6
THRAP10827 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.77■□□□□ 0.6
THRAP10827 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
THRAP10827 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 AC011506.1-201ENST00000474329 610 ntBASIC18.77■□□□□ 0.6
THRAP10827 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.77■□□□□ 0.6
THRAP10827 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.77■□□□□ 0.6
THRAP10827 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.77■□□□□ 0.6
THRAP10827 AL031598.1-201ENST00000561511 1773 ntBASIC18.77■□□□□ 0.6
THRAP10827 WIZP1-201ENST00000531444 2299 ntBASIC18.77■□□□□ 0.6
THRAP10827 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THRAP10827 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
THRAP10827 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THRAP10827 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
THRAP10827 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
THRAP10827 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.77■□□□□ 0.59
THRAP10827 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.77■□□□□ 0.59
THRAP10827 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.77■□□□□ 0.59
THRAP10827 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
THRAP10827 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.76■□□□□ 0.59
THRAP10827 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.76■□□□□ 0.59
THRAP10827 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
THRAP10827 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.76■□□□□ 0.59
THRAP10827 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.76■□□□□ 0.59
THRAP10827 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.76■□□□□ 0.59
THRAP10827 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
THRAP10827 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
THRAP10827 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
THRAP10827 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
THRAP10827 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 LTB4R2-202ENST00000528054 3092 ntBASIC18.75■□□□□ 0.59
THRAP10827 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
THRAP10827 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
THRAP10827 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
THRAP10827 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.75■□□□□ 0.59
THRAP10827 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.75■□□□□ 0.59
THRAP10827 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
THRAP10827 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
THRAP10827 HLA-A-209ENST00000638375 975 ntBASIC18.75■□□□□ 0.59
THRAP10827 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.75■□□□□ 0.59
THRAP10827 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.75■□□□□ 0.59
THRAP10827 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
THRAP10827 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
THRAP10827 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THRAP10827 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
THRAP10827 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms