Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 AL031985.4-201ENST00000642138 673 ntBASIC20.24■□□□□ 0.83
CCDC172P0C7W6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 KRT8P3-201ENST00000519669 1449 ntBASIC20.24■□□□□ 0.83
CCDC172P0C7W6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 AC009113.1-201ENST00000570267 2443 ntBASIC20.24■□□□□ 0.83
CCDC172P0C7W6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC172P0C7W6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 AC011270.2-201ENST00000624293 2550 ntBASIC20.23■□□□□ 0.83
CCDC172P0C7W6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC172P0C7W6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 RPS2P4-201ENST00000476944 856 ntBASIC20.22■□□□□ 0.83
CCDC172P0C7W6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 RARRES2P10-201ENST00000564312 460 ntBASIC20.22■□□□□ 0.83
CCDC172P0C7W6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 MYC-208ENST00000641036 567 ntBASIC20.22■□□□□ 0.83
CCDC172P0C7W6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 AC007613.1-201ENST00000572811 2597 ntBASIC20.22■□□□□ 0.83
CCDC172P0C7W6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC172P0C7W6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 AC104581.1-202ENST00000635932 2618 ntBASIC20.21■□□□□ 0.83
CCDC172P0C7W6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 AC091390.4-202ENST00000476426 537 ntBASIC20.21■□□□□ 0.83
CCDC172P0C7W6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 AC073195.1-201ENST00000607241 877 ntBASIC20.21■□□□□ 0.83
CCDC172P0C7W6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC172P0C7W6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms