Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC1P07992 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ERCC1P07992 AL445675.2-201ENST00000620291 557 ntBASIC16.61■□□□□ 0.25
ERCC1P07992 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 AC133561.5-201ENST00000635547 218 ntBASIC16.61■□□□□ 0.25
ERCC1P07992 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC1P07992 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ERCC1P07992 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ERCC1P07992 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ERCC1P07992 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC1P07992 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC1P07992 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC1P07992 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ERCC1P07992 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 ECEL1P3-201ENST00000427961 737 ntBASIC16.6■□□□□ 0.25
ERCC1P07992 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC1P07992 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC1P07992 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.6■□□□□ 0.25
ERCC1P07992 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC1P07992 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC1P07992 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ERCC1P07992 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC1P07992 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 AL031598.1-201ENST00000561511 1773 ntBASIC16.59■□□□□ 0.25
ERCC1P07992 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.59■□□□□ 0.25
ERCC1P07992 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC1P07992 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 AC087499.1-201ENST00000418141 1075 ntBASIC16.59■□□□□ 0.25
ERCC1P07992 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC1P07992 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC1P07992 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC1P07992 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC1P07992 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC1P07992 SDHAP1-207ENST00000440850 2000 ntBASIC16.58■□□□□ 0.25
ERCC1P07992 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC1P07992 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ERCC1P07992 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC1P07992 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC1P07992 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC1P07992 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ERCC1P07992 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ERCC1P07992 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC1P07992 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC1P07992 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.58■□□□□ 0.24
ERCC1P07992 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.58■□□□□ 0.24
ERCC1P07992 REXO1L10P-201ENST00000615707 1290 ntBASIC16.58■□□□□ 0.24
ERCC1P07992 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ERCC1P07992 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms