Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.73■□□□□ 0.11
CD74P04233 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.73■□□□□ 0.11
CD74P04233 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CD74P04233 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.73■□□□□ 0.11
CD74P04233 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
CD74P04233 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.73■□□□□ 0.11
CD74P04233 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.73■□□□□ 0.11
CD74P04233 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.73■□□□□ 0.11
CD74P04233 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 AC008556.1-201ENST00000610908 2040 ntBASIC15.73■□□□□ 0.11
CD74P04233 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD74P04233 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD74P04233 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD74P04233 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.72■□□□□ 0.11
CD74P04233 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.72■□□□□ 0.11
CD74P04233 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.72■□□□□ 0.11
CD74P04233 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.72■□□□□ 0.11
CD74P04233 REXO1L9P-201ENST00000604264 2108 ntBASIC15.72■□□□□ 0.11
CD74P04233 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CD74P04233 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD74P04233 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CD74P04233 KRT8P32-201ENST00000512863 1461 ntBASIC15.71■□□□□ 0.11
CD74P04233 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.71■□□□□ 0.11
CD74P04233 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CD74P04233 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.71■□□□□ 0.11
CD74P04233 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.71■□□□□ 0.11
CD74P04233 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 AL160286.2-201ENST00000567150 934 ntBASIC15.71■□□□□ 0.11
CD74P04233 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CD74P04233 AC133552.2-202ENST00000575694 574 ntBASIC15.71■□□□□ 0.11
CD74P04233 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.71■□□□□ 0.11
CD74P04233 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.71■□□□□ 0.11
CD74P04233 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms