Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN1O95832 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN1O95832 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN1O95832 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN1O95832 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN1O95832 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CLDN1O95832 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CLDN1O95832 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.71■□□□□ 0.26
CLDN1O95832 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.71■□□□□ 0.26
CLDN1O95832 AC099778.1-201ENST00000568593 1911 ntBASIC16.7■□□□□ 0.26
CLDN1O95832 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN1O95832 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN1O95832 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLDN1O95832 DRAXINP1-201ENST00000437611 948 ntBASIC16.7■□□□□ 0.26
CLDN1O95832 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.7■□□□□ 0.26
CLDN1O95832 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN1O95832 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN1O95832 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN1O95832 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN1O95832 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN1O95832 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
CLDN1O95832 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN1O95832 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLDN1O95832 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 KRT16P4-201ENST00000453883 522 ntBASIC16.69■□□□□ 0.26
CLDN1O95832 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CLDN1O95832 AC012615.1-201ENST00000565797 1299 ntBASIC16.69■□□□□ 0.26
CLDN1O95832 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 KRT8P11-201ENST00000409686 1436 ntBASIC16.69■□□□□ 0.26
CLDN1O95832 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 RNF165-205ENST00000588679 2904 ntBASIC16.69■□□□□ 0.26
CLDN1O95832 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN1O95832 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN1O95832 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLDN1O95832 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLDN1O95832 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CLDN1O95832 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CLDN1O95832 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
CLDN1O95832 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.68■□□□□ 0.26
CLDN1O95832 TSPY22P-201ENST00000427496 604 ntBASIC16.68■□□□□ 0.26
CLDN1O95832 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.68■□□□□ 0.26
CLDN1O95832 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.68■□□□□ 0.26
CLDN1O95832 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.68■□□□□ 0.26
CLDN1O95832 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLDN1O95832 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLDN1O95832 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms