Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE6O95741 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE6O95741 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
CPNE6O95741 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE6O95741 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CPNE6O95741 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE6O95741 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE6O95741 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.37■□□□□ 0.53
CPNE6O95741 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE6O95741 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPNE6O95741 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE6O95741 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE6O95741 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE6O95741 NEK4P2-201ENST00000580004 1012 ntBASIC18.36■□□□□ 0.53
CPNE6O95741 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.36■□□□□ 0.53
CPNE6O95741 AL121956.5-201ENST00000625261 221 ntBASIC18.36■□□□□ 0.53
CPNE6O95741 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CPNE6O95741 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPNE6O95741 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.35■□□□□ 0.53
CPNE6O95741 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE6O95741 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.35■□□□□ 0.53
CPNE6O95741 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.35■□□□□ 0.53
CPNE6O95741 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 AL359075.1-203ENST00000462729 1002 ntBASIC18.35■□□□□ 0.53
CPNE6O95741 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.35■□□□□ 0.53
CPNE6O95741 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE6O95741 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.35■□□□□ 0.53
CPNE6O95741 AP000550.4-202ENST00000639755 178 ntBASIC18.35■□□□□ 0.53
CPNE6O95741 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE6O95741 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.35■□□□□ 0.53
CPNE6O95741 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE6O95741 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CPNE6O95741 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE6O95741 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.34■□□□□ 0.53
CPNE6O95741 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE6O95741 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE6O95741 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE6O95741 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE6O95741 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE6O95741 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.34■□□□□ 0.53
CPNE6O95741 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CPNE6O95741 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE6O95741 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE6O95741 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms