Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.27■□□□□ 0.36
NKX2-2O95096 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX2-2O95096 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX2-2O95096 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.27■□□□□ 0.36
NKX2-2O95096 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX2-2O95096 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.27■□□□□ 0.36
NKX2-2O95096 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX2-2O95096 WWOX-216ENST00000569818 525 ntBASIC17.27■□□□□ 0.36
NKX2-2O95096 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 AC034236.2-201ENST00000606662 1610 ntBASIC17.27■□□□□ 0.36
NKX2-2O95096 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-2O95096 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX2-2O95096 AC126763.1-201ENST00000552015 2118 ntBASIC17.27■□□□□ 0.35
NKX2-2O95096 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
NKX2-2O95096 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.27■□□□□ 0.35
NKX2-2O95096 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX2-2O95096 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NKX2-2O95096 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NKX2-2O95096 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NKX2-2O95096 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.26■□□□□ 0.35
NKX2-2O95096 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 INGX-201ENST00000359239 846 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.26■□□□□ 0.35
NKX2-2O95096 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 AC128688.1-201ENST00000487626 519 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 CR769767.2-201ENST00000622735 460 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 AC036111.1-201ENST00000533973 1582 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NKX2-2O95096 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
NKX2-2O95096 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.26■□□□□ 0.35
NKX2-2O95096 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
NKX2-2O95096 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 AC009113.1-201ENST00000570267 2443 ntBASIC17.26■□□□□ 0.35
NKX2-2O95096 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-2O95096 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NKX2-2O95096 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.25■□□□□ 0.35
NKX2-2O95096 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
NKX2-2O95096 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.25■□□□□ 0.35
NKX2-2O95096 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.25■□□□□ 0.35
NKX2-2O95096 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
NKX2-2O95096 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NKX2-2O95096 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NKX2-2O95096 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NKX2-2O95096 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
NKX2-2O95096 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NKX2-2O95096 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NKX2-2O95096 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms