Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC034236.2-201ENST00000606662 1610 ntBASIC19.65■□□□□ 0.74
BEST1O76090 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST1O76090 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST1O76090 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST1O76090 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
BEST1O76090 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST1O76090 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST1O76090 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST1O76090 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST1O76090 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.64■□□□□ 0.73
BEST1O76090 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.64■□□□□ 0.73
BEST1O76090 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 HOXB1-202ENST00000577092 1414 ntBASIC19.64■□□□□ 0.73
BEST1O76090 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BEST1O76090 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.64■□□□□ 0.73
BEST1O76090 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST1O76090 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST1O76090 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BEST1O76090 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BEST1O76090 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
BEST1O76090 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BEST1O76090 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 ARMC10P1-201ENST00000313754 855 ntBASIC19.63■□□□□ 0.73
BEST1O76090 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.63■□□□□ 0.73
BEST1O76090 HOMER2P1-201ENST00000455653 964 ntBASIC19.63■□□□□ 0.73
BEST1O76090 AC092647.4-201ENST00000457211 535 ntBASIC19.63■□□□□ 0.73
BEST1O76090 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.63■□□□□ 0.73
BEST1O76090 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
BEST1O76090 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST1O76090 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BEST1O76090 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
BEST1O76090 CROCCP3-202ENST00000420820 1947 ntBASIC19.63■□□□□ 0.73
BEST1O76090 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
BEST1O76090 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
BEST1O76090 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 STARP1-201ENST00000397973 869 ntBASIC19.62■□□□□ 0.73
BEST1O76090 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BEST1O76090 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.62■□□□□ 0.73
BEST1O76090 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.62■□□□□ 0.73
BEST1O76090 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
BEST1O76090 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST1O76090 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST1O76090 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 AC018445.3-201ENST00000624177 1945 ntBASIC19.62■□□□□ 0.73
BEST1O76090 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST1O76090 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST1O76090 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST1O76090 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.62■□□□□ 0.73
BEST1O76090 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms