Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF254O75437 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF254O75437 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF254O75437 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF254O75437 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF254O75437 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF254O75437 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF254O75437 AL355802.2-201ENST00000402069 882 ntBASIC16.6■□□□□ 0.25
ZNF254O75437 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 AC090192.1-201ENST00000517740 490 ntBASIC16.6■□□□□ 0.25
ZNF254O75437 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.6■□□□□ 0.25
ZNF254O75437 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF254O75437 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF254O75437 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF254O75437 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ZNF254O75437 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 AC073592.3-201ENST00000625118 1834 ntBASIC16.59■□□□□ 0.25
ZNF254O75437 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF254O75437 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF254O75437 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF254O75437 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF254O75437 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF254O75437 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ZNF254O75437 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ZNF254O75437 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF254O75437 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF254O75437 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ZNF254O75437 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF254O75437 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ZNF254O75437 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF254O75437 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF254O75437 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF254O75437 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
ZNF254O75437 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF254O75437 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.58■□□□□ 0.25
ZNF254O75437 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.58■□□□□ 0.25
ZNF254O75437 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF254O75437 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ZNF254O75437 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 AC239809.2-201ENST00000415381 517 ntBASIC16.58■□□□□ 0.24
ZNF254O75437 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF254O75437 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
ZNF254O75437 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZNF254O75437 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF254O75437 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF254O75437 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.58■□□□□ 0.24
ZNF254O75437 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 HEIH-201ENST00000623091 1652 ntBASIC16.58■□□□□ 0.24
ZNF254O75437 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF254O75437 ABALON-201ENST00000629058 1903 ntBASIC16.58■□□□□ 0.24
ZNF254O75437 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF254O75437 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms