Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.5■□□□□ 0.71
LRCH4O75427 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRCH4O75427 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRCH4O75427 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LRCH4O75427 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.49■□□□□ 0.71
LRCH4O75427 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRCH4O75427 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRCH4O75427 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRCH4O75427 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH4O75427 MCCD1P1-208ENST00000445732 328 ntBASIC19.49■□□□□ 0.71
LRCH4O75427 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.49■□□□□ 0.71
LRCH4O75427 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.49■□□□□ 0.71
LRCH4O75427 AL023803.3-201ENST00000615559 522 ntBASIC19.49■□□□□ 0.71
LRCH4O75427 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH4O75427 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH4O75427 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.49■□□□□ 0.71
LRCH4O75427 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRCH4O75427 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.49■□□□□ 0.71
LRCH4O75427 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRCH4O75427 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRCH4O75427 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.48■□□□□ 0.71
LRCH4O75427 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LRCH4O75427 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH4O75427 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH4O75427 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH4O75427 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 AC135050.7-201ENST00000624508 2218 ntBASIC19.48■□□□□ 0.71
LRCH4O75427 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRCH4O75427 KRT17P2-201ENST00000300992 1314 ntBASIC19.48■□□□□ 0.71
LRCH4O75427 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.48■□□□□ 0.71
LRCH4O75427 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRCH4O75427 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRCH4O75427 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.48■□□□□ 0.71
LRCH4O75427 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
LRCH4O75427 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.47■□□□□ 0.71
LRCH4O75427 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.47■□□□□ 0.71
LRCH4O75427 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 BICD1-207ENST00000551848 1962 ntBASIC19.47■□□□□ 0.71
LRCH4O75427 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LRCH4O75427 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 TSPY15P-201ENST00000457163 923 ntBASIC19.47■□□□□ 0.71
LRCH4O75427 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRCH4O75427 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 AC112777.1-201ENST00000540175 1423 ntBASIC19.47■□□□□ 0.71
LRCH4O75427 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.47■□□□□ 0.71
LRCH4O75427 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.47■□□□□ 0.71
LRCH4O75427 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRCH4O75427 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRCH4O75427 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRCH4O75427 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRCH4O75427 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH4O75427 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH4O75427 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH4O75427 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH4O75427 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
LRCH4O75427 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH4O75427 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH4O75427 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH4O75427 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.46■□□□□ 0.71
LRCH4O75427 MIR564-202ENST00000385049 94 ntBASIC19.46■□□□□ 0.71
LRCH4O75427 MIR1238-201ENST00000408483 83 ntBASIC19.46■□□□□ 0.71
LRCH4O75427 SLC25A1P2-201ENST00000430693 912 ntBASIC19.46■□□□□ 0.71
LRCH4O75427 KRT18P41-201ENST00000518924 1277 ntBASIC19.46■□□□□ 0.71
LRCH4O75427 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.46■□□□□ 0.71
LRCH4O75427 MYC-208ENST00000641036 567 ntBASIC19.46■□□□□ 0.71
LRCH4O75427 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH4O75427 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH4O75427 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms