Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
GADD45BO75293 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.45■■□□□ 1.02
GADD45BO75293 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.45■■□□□ 1.02
GADD45BO75293 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GADD45BO75293 AL357033.4-201ENST00000617703 1807 ntBASIC21.45■■□□□ 1.02
GADD45BO75293 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
GADD45BO75293 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GADD45BO75293 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.45■■□□□ 1.02
GADD45BO75293 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.45■■□□□ 1.02
GADD45BO75293 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.45■■□□□ 1.02
GADD45BO75293 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GADD45BO75293 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.44■■□□□ 1.02
GADD45BO75293 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.44■■□□□ 1.02
GADD45BO75293 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GADD45BO75293 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.44■■□□□ 1.02
GADD45BO75293 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.44■■□□□ 1.02
GADD45BO75293 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.44■■□□□ 1.02
GADD45BO75293 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.44■■□□□ 1.02
GADD45BO75293 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
GADD45BO75293 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GADD45BO75293 KRT8P11-201ENST00000409686 1436 ntBASIC21.44■■□□□ 1.02
GADD45BO75293 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
GADD45BO75293 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GADD45BO75293 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
GADD45BO75293 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
GADD45BO75293 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.43■■□□□ 1.02
GADD45BO75293 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
GADD45BO75293 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.43■■□□□ 1.02
GADD45BO75293 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
GADD45BO75293 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.43■■□□□ 1.02
GADD45BO75293 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.43■■□□□ 1.02
GADD45BO75293 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GADD45BO75293 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.43■■□□□ 1.02
GADD45BO75293 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
GADD45BO75293 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.42■■□□□ 1.02
GADD45BO75293 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.42■■□□□ 1.02
GADD45BO75293 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 POM121L13P-201ENST00000422362 380 ntBASIC21.42■■□□□ 1.02
GADD45BO75293 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.42■■□□□ 1.02
GADD45BO75293 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.42■■□□□ 1.02
GADD45BO75293 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.42■■□□□ 1.02
GADD45BO75293 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.42■■□□□ 1.02
GADD45BO75293 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
GADD45BO75293 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.42■■□□□ 1.02
GADD45BO75293 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.42■■□□□ 1.02
GADD45BO75293 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GADD45BO75293 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.42■■□□□ 1.02
GADD45BO75293 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.41■■□□□ 1.02
GADD45BO75293 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.41■■□□□ 1.02
GADD45BO75293 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
GADD45BO75293 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.41■■□□□ 1.02
GADD45BO75293 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
GADD45BO75293 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GADD45BO75293 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
GADD45BO75293 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
GADD45BO75293 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.41■■□□□ 1.02
GADD45BO75293 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.41■■□□□ 1.02
GADD45BO75293 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.41■■□□□ 1.02
GADD45BO75293 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms