Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CPNE3O75131 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.97■□□□□ 0.47
CPNE3O75131 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CPNE3O75131 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CPNE3O75131 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CPNE3O75131 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE3O75131 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 MIR4674-201ENST00000582457 87 ntBASIC17.96■□□□□ 0.47
CPNE3O75131 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE3O75131 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.96■□□□□ 0.47
CPNE3O75131 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE3O75131 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CPNE3O75131 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE3O75131 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE3O75131 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE3O75131 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE3O75131 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE3O75131 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE3O75131 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.95■□□□□ 0.46
CPNE3O75131 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE3O75131 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.95■□□□□ 0.46
CPNE3O75131 AL121956.5-201ENST00000625261 221 ntBASIC17.95■□□□□ 0.46
CPNE3O75131 AL358472.4-201ENST00000633140 710 ntBASIC17.95■□□□□ 0.46
CPNE3O75131 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.95■□□□□ 0.46
CPNE3O75131 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CPNE3O75131 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE3O75131 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPNE3O75131 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CPNE3O75131 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPNE3O75131 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE3O75131 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE3O75131 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE3O75131 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPNE3O75131 AL671277.2-201ENST00000458060 996 ntBASIC17.94■□□□□ 0.46
CPNE3O75131 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE3O75131 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE3O75131 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE3O75131 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE3O75131 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE3O75131 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
CPNE3O75131 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CPNE3O75131 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE3O75131 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.93■□□□□ 0.46
CPNE3O75131 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE3O75131 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE3O75131 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE3O75131 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CPNE3O75131 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE3O75131 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE3O75131 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE3O75131 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE3O75131 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms