Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 TOB2P1-201ENST00000469761 992 ntBASIC21.86■■□□□ 1.09
CTNND1O60716 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.86■■□□□ 1.09
CTNND1O60716 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.86■■□□□ 1.09
CTNND1O60716 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.86■■□□□ 1.09
CTNND1O60716 AL390719.2-201ENST00000606993 987 ntBASIC21.86■■□□□ 1.09
CTNND1O60716 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CTNND1O60716 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.86■■□□□ 1.09
CTNND1O60716 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CTNND1O60716 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.86■■□□□ 1.09
CTNND1O60716 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CTNND1O60716 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
CTNND1O60716 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
CTNND1O60716 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.85■■□□□ 1.09
CTNND1O60716 AL732292.2-201ENST00000609649 430 ntBASIC21.85■■□□□ 1.09
CTNND1O60716 AL121772.3-201ENST00000610840 674 ntBASIC21.85■■□□□ 1.09
CTNND1O60716 KRT8P10-201ENST00000450021 1447 ntBASIC21.85■■□□□ 1.09
CTNND1O60716 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.85■■□□□ 1.09
CTNND1O60716 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTNND1O60716 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.84■■□□□ 1.09
CTNND1O60716 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.84■■□□□ 1.09
CTNND1O60716 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 AC091304.2-201ENST00000564639 760 ntBASIC21.84■■□□□ 1.09
CTNND1O60716 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CTNND1O60716 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTNND1O60716 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CTNND1O60716 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CTNND1O60716 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.83■■□□□ 1.09
CTNND1O60716 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
CTNND1O60716 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CTNND1O60716 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.83■■□□□ 1.09
CTNND1O60716 EMBP1-201ENST00000458200 901 ntBASIC21.83■■□□□ 1.09
CTNND1O60716 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.83■■□□□ 1.09
CTNND1O60716 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTNND1O60716 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.83■■□□□ 1.09
CTNND1O60716 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CTNND1O60716 FP475955.4-201ENST00000623131 1990 ntBASIC21.83■■□□□ 1.08
CTNND1O60716 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.83■■□□□ 1.08
CTNND1O60716 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.83■■□□□ 1.08
CTNND1O60716 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.83■■□□□ 1.08
CTNND1O60716 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNND1O60716 FOSL1P1-201ENST00000511041 816 ntBASIC21.82■■□□□ 1.08
CTNND1O60716 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNND1O60716 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.82■■□□□ 1.08
CTNND1O60716 IGHV3-41-201ENST00000613121 348 ntBASIC21.82■■□□□ 1.08
CTNND1O60716 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNND1O60716 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CTNND1O60716 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTNND1O60716 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNND1O60716 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.82■■□□□ 1.08
CTNND1O60716 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNND1O60716 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.81■■□□□ 1.08
CTNND1O60716 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.81■■□□□ 1.08
CTNND1O60716 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTNND1O60716 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms