Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PHGDHO43175 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PHGDHO43175 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AC073592.3-201ENST00000625118 1834 ntBASIC18.65■□□□□ 0.58
PHGDHO43175 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHGDHO43175 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHGDHO43175 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHGDHO43175 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
PHGDHO43175 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.64■□□□□ 0.57
PHGDHO43175 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PHGDHO43175 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.64■□□□□ 0.57
PHGDHO43175 CD99P1-205ENST00000527459 561 ntBASIC18.64■□□□□ 0.57
PHGDHO43175 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.64■□□□□ 0.57
PHGDHO43175 AL353708.3-201ENST00000610272 989 ntBASIC18.64■□□□□ 0.57
PHGDHO43175 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.64■□□□□ 0.57
PHGDHO43175 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.64■□□□□ 0.57
PHGDHO43175 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHGDHO43175 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.64■□□□□ 0.57
PHGDHO43175 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.63■□□□□ 0.57
PHGDHO43175 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.63■□□□□ 0.57
PHGDHO43175 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.63■□□□□ 0.57
PHGDHO43175 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.63■□□□□ 0.57
PHGDHO43175 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PHGDHO43175 KSR1P1-201ENST00000446298 240 ntBASIC18.63■□□□□ 0.57
PHGDHO43175 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PHGDHO43175 PRSS44-201ENST00000515154 1146 ntBASIC18.63■□□□□ 0.57
PHGDHO43175 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.63■□□□□ 0.57
PHGDHO43175 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.63■□□□□ 0.57
PHGDHO43175 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.63■□□□□ 0.57
PHGDHO43175 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.63■□□□□ 0.57
PHGDHO43175 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 KRT8P32-201ENST00000512863 1461 ntBASIC18.63■□□□□ 0.57
PHGDHO43175 AC079598.2-202ENST00000546624 1451 ntBASIC18.63■□□□□ 0.57
PHGDHO43175 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.63■□□□□ 0.57
PHGDHO43175 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHGDHO43175 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PHGDHO43175 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PHGDHO43175 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.62■□□□□ 0.57
PHGDHO43175 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PHGDHO43175 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PHGDHO43175 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.62■□□□□ 0.57
PHGDHO43175 AC004951.3-201ENST00000418645 1148 ntBASIC18.62■□□□□ 0.57
PHGDHO43175 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.62■□□□□ 0.57
PHGDHO43175 CR392000.1-201ENST00000624770 1228 ntBASIC18.62■□□□□ 0.57
PHGDHO43175 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PHGDHO43175 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.62■□□□□ 0.57
PHGDHO43175 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHGDHO43175 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHGDHO43175 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.61■□□□□ 0.57
PHGDHO43175 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHGDHO43175 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms