Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 AL357033.4-201ENST00000617703 1807 ntBASIC14.36□□□□□ -0.11
NDUFA4O00483 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 AL390955.1-201ENST00000428694 934 ntBASIC14.36□□□□□ -0.11
NDUFA4O00483 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.36□□□□□ -0.11
NDUFA4O00483 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 AL353719.1-201ENST00000566847 864 ntBASIC14.36□□□□□ -0.11
NDUFA4O00483 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFA4O00483 GPAT2P1-201ENST00000444924 1672 ntBASIC14.36□□□□□ -0.11
NDUFA4O00483 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFA4O00483 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFA4O00483 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFA4O00483 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFA4O00483 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFA4O00483 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 AC128688.1-201ENST00000487626 519 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 BX088651.1-201ENST00000540551 451 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 MIR3180-5-201ENST00000583743 153 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 AL023803.3-201ENST00000615559 522 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 AC066615.1-201ENST00000640911 628 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NDUFA4O00483 AC008556.1-201ENST00000610908 2040 ntBASIC14.35□□□□□ -0.11
NDUFA4O00483 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NDUFA4O00483 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA4O00483 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA4O00483 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 KRT8P45-201ENST00000414328 1447 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 WIZP1-201ENST00000531444 2299 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NDUFA4O00483 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 MMP23A-201ENST00000234610 1017 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 TSPY14P-201ENST00000303979 915 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms