Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
UPK1AO00322 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1AO00322 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1AO00322 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.77■□□□□ 0.44
UPK1AO00322 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UPK1AO00322 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.77■□□□□ 0.44
UPK1AO00322 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
UPK1AO00322 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
UPK1AO00322 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.77■□□□□ 0.44
UPK1AO00322 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 AC008040.2-201ENST00000461049 708 ntBASIC17.77■□□□□ 0.44
UPK1AO00322 AC011506.1-201ENST00000474329 610 ntBASIC17.77■□□□□ 0.44
UPK1AO00322 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1AO00322 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
UPK1AO00322 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.77■□□□□ 0.44
UPK1AO00322 AC130371.2-201ENST00000619443 611 ntBASIC17.77■□□□□ 0.44
UPK1AO00322 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1AO00322 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPK1AO00322 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1AO00322 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1AO00322 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1AO00322 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPK1AO00322 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.77■□□□□ 0.43
UPK1AO00322 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UPK1AO00322 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1AO00322 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1AO00322 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.76■□□□□ 0.43
UPK1AO00322 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.76■□□□□ 0.43
UPK1AO00322 AC012618.2-201ENST00000428058 849 ntBASIC17.76■□□□□ 0.43
UPK1AO00322 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.76■□□□□ 0.43
UPK1AO00322 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.76■□□□□ 0.43
UPK1AO00322 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1AO00322 AC233702.5-201ENST00000584107 538 ntBASIC17.76■□□□□ 0.43
UPK1AO00322 AC011298.2-201ENST00000617989 482 ntBASIC17.76■□□□□ 0.43
UPK1AO00322 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.76■□□□□ 0.43
UPK1AO00322 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPK1AO00322 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UPK1AO00322 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 MESTP1-201ENST00000404287 994 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK1AO00322 B3GAT3P1-201ENST00000471720 806 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 PRSS44-201ENST00000515154 1146 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK1AO00322 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
UPK1AO00322 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK1AO00322 MIR6786-201ENST00000616843 113 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 AC113410.3-201ENST00000623366 203 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 AC083906.6-201ENST00000641366 219 ntBASIC17.75■□□□□ 0.43
UPK1AO00322 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
UPK1AO00322 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.75■□□□□ 0.43
UPK1AO00322 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.75■□□□□ 0.43
UPK1AO00322 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPK1AO00322 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.74■□□□□ 0.43
UPK1AO00322 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPK1AO00322 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.74■□□□□ 0.43
UPK1AO00322 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPK1AO00322 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms