Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 AL499627.1-201ENST00000569373 2188 ntBASIC17.34■□□□□ 0.37
TNFRSF11BO00300 SOX15-203ENST00000570788 1093 ntBASIC17.34■□□□□ 0.37
TNFRSF11BO00300 MIR4758-201ENST00000577688 71 ntBASIC17.34■□□□□ 0.37
TNFRSF11BO00300 AC020916.1-201ENST00000587762 1774 ntBASIC17.34■□□□□ 0.37
TNFRSF11BO00300 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 MYC-209ENST00000641252 345 ntBASIC17.34■□□□□ 0.37
TNFRSF11BO00300 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TNFRSF11BO00300 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TNFRSF11BO00300 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.33■□□□□ 0.37
TNFRSF11BO00300 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 AC006970.2-201ENST00000450065 779 ntBASIC17.33■□□□□ 0.36
TNFRSF11BO00300 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 IKBKGP1-201ENST00000612193 1073 ntBASIC17.33■□□□□ 0.36
TNFRSF11BO00300 HLA-A-209ENST00000638375 975 ntBASIC17.33■□□□□ 0.36
TNFRSF11BO00300 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TNFRSF11BO00300 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 PKD1P1-201ENST00000458669 6805 ntBASIC17.32■□□□□ 0.36
TNFRSF11BO00300 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.32■□□□□ 0.36
TNFRSF11BO00300 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF11BO00300 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF11BO00300 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms