Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC128688.1-201ENST00000487626 519 ntBASIC19.24■□□□□ 0.67
DFFAO00273 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 MIR4674-201ENST00000582457 87 ntBASIC19.24■□□□□ 0.67
DFFAO00273 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.24■□□□□ 0.67
DFFAO00273 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 AC073912.3-201ENST00000624414 853 ntBASIC19.24■□□□□ 0.67
DFFAO00273 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
DFFAO00273 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.24■□□□□ 0.67
DFFAO00273 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.24■□□□□ 0.67
DFFAO00273 AC008556.1-201ENST00000610908 2040 ntBASIC19.24■□□□□ 0.67
DFFAO00273 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DFFAO00273 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
DFFAO00273 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DFFAO00273 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.23■□□□□ 0.67
DFFAO00273 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
DFFAO00273 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 ECEL1P2-202ENST00000465689 757 ntBASIC19.23■□□□□ 0.67
DFFAO00273 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
DFFAO00273 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.23■□□□□ 0.67
DFFAO00273 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DFFAO00273 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.23■□□□□ 0.67
DFFAO00273 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
DFFAO00273 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 MTMR9LP-203ENST00000426597 1545 ntBASIC19.22■□□□□ 0.67
DFFAO00273 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.22■□□□□ 0.67
DFFAO00273 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.22■□□□□ 0.67
DFFAO00273 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.22■□□□□ 0.67
DFFAO00273 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
DFFAO00273 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
DFFAO00273 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
DFFAO00273 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DFFAO00273 AL031598.1-201ENST00000561511 1773 ntBASIC19.21■□□□□ 0.67
DFFAO00273 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
DFFAO00273 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.21■□□□□ 0.67
DFFAO00273 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DFFAO00273 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DFFAO00273 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DFFAO00273 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.21■□□□□ 0.67
DFFAO00273 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.21■□□□□ 0.67
DFFAO00273 ANO7L1-203ENST00000602586 1720 ntBASIC19.21■□□□□ 0.67
DFFAO00273 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DFFAO00273 AC093525.10-201ENST00000625130 1569 ntBASIC19.21■□□□□ 0.67
DFFAO00273 AC133561.5-201ENST00000635547 218 ntBASIC19.21■□□□□ 0.67
DFFAO00273 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DFFAO00273 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
DFFAO00273 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms