Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC188H7C350 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
CCDC188H7C350 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC188H7C350 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC188H7C350 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC188H7C350 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC188H7C350 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC188H7C350 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 PRKY-204ENST00000533551 1019 ntBASIC19.48■□□□□ 0.71
CCDC188H7C350 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC188H7C350 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC188H7C350 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC188H7C350 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 AC138028.4-201ENST00000564984 1845 ntBASIC19.48■□□□□ 0.71
CCDC188H7C350 AC134043.2-201ENST00000624206 2238 ntBASIC19.48■□□□□ 0.71
CCDC188H7C350 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC188H7C350 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC188H7C350 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC188H7C350 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC188H7C350 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC188H7C350 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC188H7C350 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 POU5F1P3-201ENST00000428824 1078 ntBASIC19.47■□□□□ 0.71
CCDC188H7C350 GUSBP6-202ENST00000438529 1198 ntBASIC19.47■□□□□ 0.71
CCDC188H7C350 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC188H7C350 LINC00896-202ENST00000609602 2128 ntBASIC19.47■□□□□ 0.71
CCDC188H7C350 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
CCDC188H7C350 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC188H7C350 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC188H7C350 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC188H7C350 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC188H7C350 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.46■□□□□ 0.71
CCDC188H7C350 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC188H7C350 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC188H7C350 KRT8P3-201ENST00000519669 1449 ntBASIC19.46■□□□□ 0.71
CCDC188H7C350 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC188H7C350 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC188H7C350 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC188H7C350 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC188H7C350 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.46■□□□□ 0.71
CCDC188H7C350 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC188H7C350 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC188H7C350 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms