Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 BICD1-207ENST00000551848 1962 ntBASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 REXO1L1P-201ENST00000379010 6598 ntBASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 PCDH8P1-201ENST00000428983 2773 ntBASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 AC087239.1-201ENST00000622671 572 ntBASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 NARF-205ENST00000412079 1760 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CHKB-CPT1BH3BT56 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 FP325330.2-201ENST00000624219 5630 ntBASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 AD000864.1-201ENST00000624076 2295 ntBASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 AC022616.5-201ENST00000518796 181 ntBASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.4□□□□□ -0.74
CHKB-CPT1BH3BT56 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.4□□□□□ -0.75
CHKB-CPT1BH3BT56 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms