Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC01546A6NGU7 AC106820.2-201ENST00000563775 3264 ntBASIC13.23□□□□□ -0.29
LINC01546A6NGU7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 BID-214ENST00000617586 542 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC01546A6NGU7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 AL096828.2-201ENST00000567259 1965 ntBASIC13.21□□□□□ -0.29
LINC01546A6NGU7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 AL139384.1-201ENST00000612143 3047 ntBASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 KRT18P61-201ENST00000585825 1298 ntBASIC13.21□□□□□ -0.29
LINC01546A6NGU7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC01546A6NGU7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC01546A6NGU7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC01546A6NGU7 AL390719.1-204ENST00000412397 1219 ntBASIC13.2□□□□□ -0.3
LINC01546A6NGU7 TUBB8P6-201ENST00000436895 1288 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms