Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRAMEF25A6NGN4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 TSPY15P-201ENST00000457163 923 ntBASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AC008040.2-201ENST00000461049 708 ntBASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AP000692.2-201ENST00000608391 879 ntBASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PRAMEF25A6NGN4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 AC079598.2-202ENST00000546624 1451 ntBASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 TSPY23P-201ENST00000440136 739 ntBASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 AP000525.1-201ENST00000608286 694 ntBASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PRAMEF25A6NGN4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.55■□□□□ 0.4
PRAMEF25A6NGN4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms