Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC160A6NGH7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 AL162727.3-201ENST00000635661 2787 ntBASIC17.41■□□□□ 0.38
CCDC160A6NGH7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC160A6NGH7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 AC092171.4-201ENST00000609130 632 ntBASIC17.4■□□□□ 0.38
CCDC160A6NGH7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC160A6NGH7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC160A6NGH7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC160A6NGH7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC160A6NGH7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.39■□□□□ 0.38
CCDC160A6NGH7 KRT8P17-201ENST00000453110 1448 ntBASIC17.39■□□□□ 0.38
CCDC160A6NGH7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC160A6NGH7 TSPY9P-201ENST00000440215 945 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms