Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 AC133552.2-202ENST00000575694 574 ntBASIC16.33■□□□□ 0.2
SHISA3A0PJX4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 RAP2CP1-201ENST00000605103 478 ntBASIC16.33■□□□□ 0.2
SHISA3A0PJX4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SHISA3A0PJX4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 AL162430.1-201ENST00000480705 870 ntBASIC16.31■□□□□ 0.2
SHISA3A0PJX4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SHISA3A0PJX4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.3■□□□□ 0.2
SHISA3A0PJX4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SHISA3A0PJX4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms