Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 KRASP1-201ENST00000407852 552 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 AC239809.2-201ENST00000415381 517 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 AC026366.1-201ENST00000488803 879 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 Z85996.1-201ENST00000494644 937 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 RNA5SP413-201ENST00000516373 109 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 AC090192.1-201ENST00000517740 490 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 AL023875.1-201ENST00000640777 796 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 ABALON-201ENST00000629058 1903 ntBASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00959A0A1B0GUT2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 AC131212.4-201ENST00000623606 975 ntBASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 NOC2LP1-202ENST00000452600 2235 ntBASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00959A0A1B0GUT2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00959A0A1B0GUT2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 POU5F1P3-201ENST00000428824 1078 ntBASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 MYC-208ENST00000641036 567 ntBASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 AC068587.9-201ENST00000641814 219 ntBASIC12.77□□□□□ -0.37
LINC00959A0A1B0GUT2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms