Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 AC036111.1-201ENST00000533973 1582 ntBASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
DNMT3AQ9Y6K1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 HOXB1-202ENST00000577092 1414 ntBASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 AC034236.2-201ENST00000606662 1610 ntBASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DNMT3AQ9Y6K1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 RNF152P1-201ENST00000397754 604 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AK4P3-201ENST00000418260 669 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AC117947.1-201ENST00000427448 529 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 YBX1P2-201ENST00000489612 999 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 AC139887.4-201ENST00000607877 719 ntBASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DNMT3AQ9Y6K1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 AC006011.2-201ENST00000621313 1158 ntBASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3AQ9Y6K1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms