Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 RCC2P3-201ENST00000418112 1537 ntBASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CYP46A1Q9Y6A2 AL357033.4-201ENST00000617703 1807 ntBASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 AC233702.5-201ENST00000584107 538 ntBASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 AP001412.1-201ENST00000608405 714 ntBASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 AC096733.2-201ENST00000609937 1394 ntBASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CYP46A1Q9Y6A2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 AC113410.3-201ENST00000623366 203 ntBASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 AL049637.2-201ENST00000641778 930 ntBASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CYP46A1Q9Y6A2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 SLC25A1P4-201ENST00000567977 778 ntBASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 DGCR10-201ENST00000609839 495 ntBASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.22■■□□□ 1.15
CYP46A1Q9Y6A2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 BICD1-207ENST00000551848 1962 ntBASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms