Protein–RNA interactions for Protein: Q9Y5J5

PHLDA3, Pleckstrin homology-like domain family A member 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3Q9Y5J5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 MIR663A-201ENST00000385250 93 ntBASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 MIPEPP3-201ENST00000412105 444 ntBASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 AC026271.2-201ENST00000428091 497 ntBASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 AC022517.1-201ENST00000592429 346 ntBASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PHLDA3Q9Y5J5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 AC073111.5-205ENST00000641717 521 ntBASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.87□□□□□ -0.19
PHLDA3Q9Y5J5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 TSPY21P-201ENST00000433481 731 ntBASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 AC026185.1-201ENST00000445748 174 ntBASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 AC092118.2-201ENST00000613495 667 ntBASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHLDA3Q9Y5J5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms