Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA11Q9Y5H2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 KRT8P3-201ENST00000519669 1449 ntBASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 CKBP1-201ENST00000565489 1086 ntBASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA11Q9Y5H2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AC020763.4-201ENST00000623414 4170 ntBASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AC008040.2-201ENST00000461049 708 ntBASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AP000692.2-201ENST00000608391 879 ntBASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA11Q9Y5H2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 AC233702.5-201ENST00000584107 538 ntBASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 AC018470.1-201ENST00000624790 3129 ntBASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHGA11Q9Y5H2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGA11Q9Y5H2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms